There are 16 CAAS institutes located in Beijing:
- Institute of Crop Sciences (ICS)
- Institute of Plant Protection (IPP)
- Institute of Vegetable and Flowers (IVF)
- Institute of Environment and Sustainable Development in Agriculture (IEDA)
- Institute of Animal Sciences (IAS)
- Institute of Apiculture Research (IAR)
- Feed Research Institute (FRI)
- Institute of Food Science and Technology (IFST)
- Biotechnology Research Institute (BRI)
- Institute of Agricultural Economics and Development (IAED)
- Institute of Agricultural Resources and Regional Planning (IARRP)
- Agriculture Information Institute (AII)
- Institute of Quality Standards and Testing Technology for Agro-Products (IQSTAP)
- Institute of Food and Nutrition Development of MARA
- Graduate School
- China Agricultural Science and Technology Press (CASTP)